Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase rfba | BEN53_RS23495 | Not Available | Positive | 4611231 - 4612112 | 32736.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | BEN53_RS23500 | Not Available | Positive | 4612090 - 4612764 | 24219.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | BEN53_RS23505 | Not Available | Positive | 4612769 - 4613899 | 41922.4 |
| lipid iii flippase wzxe | BEN53_RS23510 | Not Available | Positive | 4613901 - 4615151 | 44994.4 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | BEN53_RS23515 | Not Available | Positive | 4615148 - 4616227 | 40650.8 |
| eca oligosaccharide polymerase | BEN53_RS23520 | Not Available | Positive | 4616224 - 4617576 | 51496.1 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | BEN53_RS23525 | Not Available | Positive | 4617579 - 4618319 | 27963.8 |
| bifunctional threonine/serine apc transporter thrp | BEN53_RS23530 | Not Available | Positive | 4618510 - 4619895 | 50416.1 |
| Trna-arg | Not Available | Not Available | Positive | 4619998 - 4620074 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 4620133 - 4620208 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




