Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toll/interleukin-1 receptor domain-containing protein | BEN53_RS01565 | Not Available | Negative | 304220 - 305257 | 39158.6 |
| class i sam-dependent dna methyltransferase | BEN53_RS01570 | Not Available | Positive | 305501 - 307000 | 56567.6 |
| class i sam-dependent dna methyltransferase | BEN53_RS01575 | Not Available | Positive | 307006 - 308496 | 56727.5 |
| restriction endonuclease subunit s | BEN53_RS01580 | Not Available | Positive | 308497 - 309663 | 44440.5 |
| type i restriction endonuclease subunit r | BEN53_RS01585 | Not Available | Positive | 309665 - 312727 | 116100.0 |
| n-6 dna methylase | BEN53_RS01590 | Not Available | Negative | 312808 - 314715 | 72877.8 |
| aaa family atpase | BEN53_RS01595 | Not Available | Negative | 314712 - 316445 | 66510.0 |
| sialate o-acetylesterase | BEN53_RS01605 | Not Available | Negative | 317307 - 318293 | 36988.1 |
| n-acetylneuraminate epimerase | BEN53_RS01610 | Not Available | Negative | 318358 - 319464 | 39634.4 |
| n-acetylneuraminic acid outer membrane channel nanc | BEN53_RS01615 | Not Available | Negative | 319484 - 320200 | 27889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




