Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long polar fimbrial chaperone lpfb-o113 | BEN53_RS23180 | Not Available | Negative | 4547949 - 4548680 | 27207.4 |
| long polar fimbria major subunit lpfa-o113 | BEN53_RS23185 | Not Available | Negative | 4548728 - 4549300 | 19666.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | BEN53_RS23190 | Not Available | Negative | 4549608 - 4551437 | 66856.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | BEN53_RS23195 | Not Available | Negative | 4551599 - 4552969 | 49253.2 |
| f0f1 atp synthase subunit epsilon | BEN53_RS23200 | Not Available | Negative | 4553318 - 4553737 | 15069.2 |
| f0f1 atp synthase subunit beta | BEN53_RS23205 | Not Available | Negative | 4553758 - 4555140 | 50328.5 |
| f0f1 atp synthase subunit gamma | BEN53_RS23210 | Not Available | Negative | 4555167 - 4556030 | 31579.3 |
| f0f1 atp synthase subunit alpha | BEN53_RS23215 | Not Available | Negative | 4556081 - 4557622 | 55225.4 |
| f0f1 atp synthase subunit delta | BEN53_RS23220 | Not Available | Negative | 4557635 - 4558168 | 19347.4 |
| f0f1 atp synthase subunit b | BEN53_RS23225 | Not Available | Negative | 4558183 - 4558653 | 17264.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




