Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS01510 | Not Available | Positive | 291601 - 291984 | 13415.1 |
| hypothetical protein | BEN53_RS01515 | Not Available | Positive | 291999 - 293030 | 37371.1 |
| hypothetical protein | BEN53_RS01520 | Not Available | Positive | 293194 - 293391 | 7273.68 |
| hypothetical protein | BEN53_RS01525 | Not Available | Positive | 293426 - 295267 | 66806.9 |
| phage baseplate protein | BEN53_RS01530 | Not Available | Positive | 295315 - 295992 | 24481.0 |
| site-specific integrase | BEN53_RS01535 | Not Available | Negative | 296073 - 297344 | 48775.7 |
| hnh endonuclease | BEN53_RS01540 | Not Available | Positive | 297851 - 298630 | 29154.6 |
| hypothetical protein | BEN53_RS01545 | Not Available | Positive | 298699 - 299076 | 13829.9 |
| aaa domain-containing protein | BEN53_RS01555 | Not Available | Positive | 299402 - 302917 | 131614.0 |
| restriction endonuclease | BEN53_RS01560 | Not Available | Positive | 303046 - 304035 | 37201.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




