Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase-like hydrolase/transferase | BEN53_RS22915 | Not Available | Negative | 4491121 - 4492614 | 57427.6 |
| solute:sodium symporter family transporter | BEN53_RS22920 | Not Available | Negative | 4492611 - 4494326 | 62098.7 |
| helix-turn-helix transcriptional regulator | BEN53_RS22925 | Not Available | Positive | 4494493 - 4495386 | 33966.7 |
| 6-phospho-alpha-glucosidase | BEN53_RS22930 | Not Available | Negative | 4495383 - 4496705 | 49316.0 |
| pts sugar transporter subunit iib | BEN53_RS22935 | Not Available | Negative | 4496705 - 4498321 | 58349.2 |
| gntr family transcriptional regulator | BEN53_RS22940 | Not Available | Positive | 4498617 - 4499333 | 27310.4 |
| putative transporter | BEN53_RS22945 | Not Available | Negative | 4499330 - 4500991 | 58982.9 |
| small heat shock chaperone ibpb | BEN53_RS22950 | Not Available | Negative | 4501187 - 4501615 | 16094.1 |
| small heat shock chaperone ibpa | BEN53_RS22955 | Not Available | Negative | 4501727 - 4502140 | 15774.6 |
| ycek/yidq family lipoprotein | BEN53_RS22960 | Not Available | Positive | 4502446 - 4502778 | 11826.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




