Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS22850 | Not Available | Negative | 4484010 - 4484492 | 17766.8 |
| acetolactate synthase small subunit | BEN53_RS22855 | Not Available | Negative | 4485556 - 4485846 | 11106.4 |
| acetolactate synthase large subunit | BEN53_RS22860 | Not Available | Negative | 4485850 - 4487538 | 60446.3 |
| ilvb operon leader peptide ivbl | BEN53_RS22865 | Not Available | Negative | 4487644 - 4487742 | 3206.11 |
| type i toxin-antitoxin system toxin tisb | BEN53_RS22885 | Not Available | Positive | 4488307 - 4488396 | 3195.29 |
| protein ysde | BEN53_RS27505 | Not Available | Negative | 4488520 - 4488594 | 2827.45 |
| multidrug efflux mfs transporter emrd | BEN53_RS22895 | Not Available | Positive | 4488676 - 4489860 | 42227.5 |
| radical sam protein | BEN53_RS22900 | Not Available | Negative | 4489868 - 4490365 | 19185.9 |
| duf202 domain-containing protein | BEN53_RS22905 | Not Available | Negative | 4490362 - 4490724 | 13769.1 |
| yidh family protein | BEN53_RS22910 | Not Available | Negative | 4490714 - 4491061 | 12794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




