Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS22800 | Not Available | Positive | 4472623 - 4472930 | 11526.0 |
| helix-turn-helix domain-containing protein | BEN53_RS22805 | Not Available | Positive | 4472914 - 4473237 | 11639.2 |
| duf1198 domain-containing protein | BEN53_RS22810 | Not Available | Negative | 4473353 - 4473805 | 17220.1 |
| adenine permease adeq | BEN53_RS22815 | Not Available | Negative | 4473858 - 4475192 | 46984.6 |
| adenine deaminase | BEN53_RS22820 | Not Available | Positive | 4475367 - 4477133 | 63776.2 |
| hexose-6-phosphate:phosphate antiporter | BEN53_RS22825 | Not Available | Negative | 4477180 - 4478571 | 50608.6 |
| mfs transporter family glucose-6-phosphate receptor uhpc | BEN53_RS22830 | Not Available | Negative | 4478709 - 4480028 | 48208.2 |
| signal transduction histidine-protein kinase/phosphatase uhpb | BEN53_RS22835 | Not Available | Negative | 4480038 - 4481540 | 56366.3 |
| transcriptional regulator uhpa | BEN53_RS22840 | Not Available | Negative | 4481540 - 4482130 | 20890.6 |
| hypothetical protein | BEN53_RS22845 | Not Available | Negative | 4482292 - 4483731 | 53841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




