Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS22320 | Not Available | Negative | 4377734 - 4378177 | 16209.5 |
| perc family transcriptional regulator | BEN53_RS22325 | Not Available | Positive | 4378440 - 4378727 | 11185.2 |
| dna damage-inducible protein d | BEN53_RS22330 | Not Available | Positive | 4379475 - 4380299 | 31151.7 |
| trimeric intracellular cation channel family protein | BEN53_RS22335 | Not Available | Positive | 4380590 - 4381207 | 22049.8 |
| nad-dependent dna ligase ligb | BEN53_RS22340 | Not Available | Negative | 4381204 - 4382886 | 63192.9 |
| guanylate kinase | BEN53_RS22345 | Not Available | Positive | 4383144 - 4383767 | 23594.1 |
| dna-directed rna polymerase subunit omega | BEN53_RS22350 | Not Available | Positive | 4383822 - 4384097 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | BEN53_RS22355 | Not Available | Positive | 4384116 - 4386224 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | BEN53_RS22360 | Not Available | Positive | 4386231 - 4386920 | 25372.7 |
| atp-dependent dna helicase recg | BEN53_RS22365 | Not Available | Positive | 4386926 - 4389007 | 76512.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




