Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | BEN53_RS22215 | Not Available | Positive | 4362087 - 4363355 | 48660.8 |
| hypothetical protein | BEN53_RS22220 | Not Available | Positive | 4363352 - 4364002 | 24305.3 |
| helix-turn-helix transcriptional regulator | BEN53_RS22225 | Not Available | Positive | 4364474 - 4364692 | 8046.8 |
| hypothetical protein | BEN53_RS22230 | Not Available | Positive | 4364692 - 4365123 | 16367.6 |
| anta/antb antirepressor family protein | BEN53_RS22235 | Not Available | Positive | 4365136 - 4365969 | 31096.2 |
| duf4222 domain-containing protein | BEN53_RS22240 | Not Available | Positive | 4365962 - 4366141 | 6740.03 |
| hypothetical protein | BEN53_RS27655 | Not Available | Positive | 4366426 - 4366728 | 10270.4 |
| host cell division inhibitor icd-like protein | BEN53_RS27660 | Not Available | Positive | 4366761 - 4366955 | 7355.96 |
| hypothetical protein | BEN53_RS22250 | Not Available | Positive | 4367159 - 4367353 | 6572.89 |
| nicotinic acetylcholine receptor subunit beta | BEN53_RS22255 | Not Available | Positive | 4367350 - 4367613 | 9741.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




