Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | BEN53_RS22110 | Not Available | Negative | 4344651 - 4345634 | 38731.3 |
| udp-galactose--(galactosyl) lps alpha1,2-galactosyltransferase | BEN53_RS22115 | Not Available | Negative | 4345716 - 4346744 | 39504.1 |
| lipopolysaccharide core heptose(ii) kinase rfay | BEN53_RS22120 | Not Available | Negative | 4346770 - 4347462 | 26995.8 |
| glycosyltransferase family 8 protein | BEN53_RS22125 | Not Available | Negative | 4347472 - 4348467 | 38492.9 |
| lipopolysaccharide 3-alpha-galactosyltransferase | BEN53_RS22130 | Not Available | Negative | 4348484 - 4349500 | 38870.8 |
| lipopolysaccharide core heptose(i) kinase rfap | BEN53_RS22135 | Not Available | Negative | 4349516 - 4350313 | 31135.2 |
| glycosyltransferase family 4 protein | BEN53_RS22140 | Not Available | Negative | 4350306 - 4351430 | 42558.7 |
| lipopolysaccharide core heptosyltransferase rfaq | BEN53_RS22145 | Not Available | Negative | 4351427 - 4352485 | 39462.9 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | BEN53_RS22150 | Not Available | Positive | 4352898 - 4354175 | 47309.9 |
| pantetheine-phosphate adenylyltransferase | BEN53_RS22155 | Not Available | Positive | 4354183 - 4354662 | 17837.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




