Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yada-like family protein | BEN53_RS22005 | Not Available | Positive | 4320148 - 4324797 | 155346.0 |
| l-lactate permease | BEN53_RS22010 | Not Available | Positive | 4325094 - 4326749 | 59203.6 |
| transcriptional regulator lldr | BEN53_RS22015 | Not Available | Positive | 4326749 - 4327525 | 29167.9 |
| quinone-dependent l-lactate dehydrogenase | BEN53_RS22020 | Not Available | Positive | 4327522 - 4328712 | 42732.6 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | BEN53_RS22025 | Not Available | Positive | 4328760 - 4329233 | 17727.3 |
| serine o-acetyltransferase | BEN53_RS22030 | Not Available | Negative | 4329286 - 4330107 | 29318.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | BEN53_RS22035 | Not Available | Negative | 4330187 - 4331206 | 36363.8 |
| protein-export chaperone secb | BEN53_RS22040 | Not Available | Negative | 4331206 - 4331673 | 17278.3 |
| glutaredoxin 3 | BEN53_RS22045 | Not Available | Negative | 4331736 - 4331987 | 9138.01 |
| rhodanese-like domain-containing protein | BEN53_RS22050 | Not Available | Negative | 4332129 - 4332560 | 15597.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




