Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-like helix-turn-helix dna-binding protein | BEN53_RS21955 | Not Available | Positive | 4310533 - 4311039 | 19816.2 |
| hypothetical protein | BEN53_RS21960 | Not Available | Positive | 4311231 - 4312060 | 31355.2 |
| hlyd family secretion protein | BEN53_RS21965 | Not Available | Negative | 4312216 - 4313352 | 41990.8 |
| duf3302 domain-containing protein | BEN53_RS21970 | Not Available | Negative | 4313355 - 4313717 | 13866.8 |
| pts mannitol transporter subunit iicba | BEN53_RS21975 | Not Available | Positive | 4314253 - 4316166 | 67990.5 |
| mannitol-1-phosphate 5-dehydrogenase | BEN53_RS21980 | Not Available | Positive | 4316261 - 4317409 | 41140.5 |
| mannitol operon repressor mtlr | BEN53_RS21985 | Not Available | Positive | 4317409 - 4317996 | 21991.4 |
| protein yibt | BEN53_RS21990 | Not Available | Negative | 4318007 - 4318216 | 8067.86 |
| yibl family ribosome-associated protein | BEN53_RS21995 | Not Available | Positive | 4318500 - 4318862 | 13696.8 |
| duf3251 domain-containing protein | BEN53_RS22000 | Not Available | Positive | 4319421 - 4320104 | 25499.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




