Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| as(iii)-sensing metalloregulatory transcriptional repressor arsr | BEN53_RS21295 | Not Available | Positive | 4171339 - 4171692 | 13308.4 |
| arsenite/antimonite:h(+) antiporter arsb | BEN53_RS21300 | Not Available | Positive | 4171747 - 4173036 | 45484.2 |
| glutaredoxin-dependent arsenate reductase | BEN53_RS21305 | Not Available | Positive | 4173049 - 4173474 | 15993.4 |
| arsr/smtb family transcription factor | BEN53_RS21310 | Not Available | Negative | 4173495 - 4173815 | 11667.4 |
| permease | BEN53_RS21315 | Not Available | Positive | 4173923 - 4174924 | 35259.8 |
| hypothetical protein | BEN53_RS21320 | Not Available | Positive | 4175503 - 4176726 | 47373.8 |
| outer membrane lipoprotein slp | BEN53_RS21325 | Not Available | Positive | 4176972 - 4177538 | 20949.1 |
| helix-turn-helix transcriptional regulator | BEN53_RS21335 | Not Available | Positive | 4177691 - 4178221 | 20442.5 |
| hematinate-forming heme oxygenase chus | BEN53_RS21340 | Not Available | Negative | 4178282 - 4179310 | 38638.8 |
| tonb-dependent heme/hemoglobin receptor chua/shua | BEN53_RS21345 | Not Available | Negative | 4179359 - 4181341 | 72560.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




