Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter pita | BEN53_RS21240 | Not Available | Positive | 4160628 - 4162127 | 53392.4 |
| universal stress protein uspb | BEN53_RS21245 | Not Available | Negative | 4162198 - 4162533 | 13028.1 |
| universal stress protein uspa | BEN53_RS21250 | Not Available | Positive | 4162924 - 4163358 | 16067.3 |
| protein yrib | BEN53_RS27495 | Not Available | Negative | 4163455 - 4163508 | 1904.39 |
| dipeptide/tripeptide permease dtpb | BEN53_RS21260 | Not Available | Positive | 4163674 - 4165143 | 53578.4 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | BEN53_RS21265 | Not Available | Negative | 4165192 - 4165944 | 26906.7 |
| oligopeptidase a | BEN53_RS21270 | Not Available | Negative | 4165952 - 4167994 | 77150.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase | BEN53_RS21275 | Not Available | Positive | 4168197 - 4169039 | 32040.6 |
| glutathione-disulfide reductase | BEN53_RS21280 | Not Available | Positive | 4169111 - 4170463 | 48727.3 |
| damage-inducible type i toxin dinq | BEN53_RS21285 | Not Available | Negative | 4170517 - 4170600 | 3021.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




