Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division atp-binding protein ftse | BEN53_RS21090 | Not Available | Negative | 4130502 - 4131170 | 24440.8 |
| signal recognition particle-docking protein ftsy | BEN53_RS21095 | Not Available | Negative | 4131173 - 4132660 | 54377.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | BEN53_RS21100 | Not Available | Positive | 4132810 - 4133406 | 21763.0 |
| duf1145 family protein | BEN53_RS21105 | Not Available | Positive | 4133396 - 4133665 | 10280.4 |
| duf2500 domain-containing protein | BEN53_RS21110 | Not Available | Negative | 4133668 - 4134027 | 13529.4 |
| lysoplasmalogenase | BEN53_RS21115 | Not Available | Positive | 4134168 - 4134794 | 23791.9 |
| zn(ii)/cd(ii)/pb(ii) translocating p-type atpase znta | BEN53_RS21120 | Not Available | Positive | 4134868 - 4137066 | 76798.3 |
| hypothetical protein | BEN53_RS21125 | Not Available | Negative | 4137099 - 4137407 | 11420.8 |
| sulfurtransferase tusa | BEN53_RS21130 | Not Available | Negative | 4137622 - 4137867 | 9125.11 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | BEN53_RS21135 | Not Available | Positive | 4138088 - 4138753 | 25299.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




