Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase glpe | BEN53_RS20880 | Not Available | Negative | 4084561 - 4084887 | 12083.1 |
| glycerol-3-phosphate dehydrogenase | BEN53_RS20885 | Not Available | Positive | 4085077 - 4086582 | 56719.8 |
| hypothetical protein | BEN53_RS20890 | Not Available | Negative | 4086635 - 4087240 | 23333.2 |
| psts family phosphate abc transporter substrate-binding protein | BEN53_RS20895 | Not Available | Negative | 4087243 - 4088235 | 37122.0 |
| psts family phosphate abc transporter substrate-binding protein | BEN53_RS20900 | Not Available | Negative | 4088261 - 4089769 | 56510.7 |
| glycogen phosphorylase | BEN53_RS20905 | Not Available | Negative | 4089895 - 4092342 | 93220.8 |
| glycogen synthase glga | BEN53_RS20910 | Not Available | Negative | 4092361 - 4093794 | 52825.4 |
| glucose-1-phosphate adenylyltransferase | BEN53_RS20915 | Not Available | Negative | 4093794 - 4095089 | 48700.4 |
| glycogen debranching protein glgx | BEN53_RS20920 | Not Available | Negative | 4095107 - 4097080 | 73662.8 |
| 1,4-alpha-glucan branching enzyme | BEN53_RS20925 | Not Available | Negative | 4097077 - 4099263 | 84359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




