Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s biogenesis protein nfua | BEN53_RS20830 | Not Available | Positive | 4068741 - 4069316 | 20998.9 |
| gluconate transporter | BEN53_RS20835 | Not Available | Positive | 4069677 - 4070993 | 45969.6 |
| 4-alpha-glucanotransferase | BEN53_RS20840 | Not Available | Negative | 4071038 - 4073122 | 78445.6 |
| maltodextrin phosphorylase | BEN53_RS20845 | Not Available | Negative | 4073132 - 4075525 | 90556.4 |
| hth-type transcriptional regulator malt | BEN53_RS20850 | Not Available | Positive | 4076148 - 4078853 | 103035.0 |
| rna 3'-terminal phosphate cyclase | BEN53_RS20855 | Not Available | Negative | 4078896 - 4079912 | 35934.5 |
| rna-splicing ligase rtcb | BEN53_RS20860 | Not Available | Negative | 4079916 - 4081142 | 45192.4 |
| dna-binding transcriptional regulator rtcr | BEN53_RS20865 | Not Available | Positive | 4081331 - 4082929 | 60251.6 |
| deor/glpr family transcriptional regulator | BEN53_RS20870 | Not Available | Negative | 4082911 - 4083669 | 28049.6 |
| rhomboid family intramembrane serine protease glpg | BEN53_RS20875 | Not Available | Negative | 4083686 - 4084516 | 31308.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




