Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | BEN53_RS01305 | Not Available | Negative | 249446 - 251584 | 80043.0 |
| alpha,alpha-phosphotrehalase | BEN53_RS01310 | Not Available | Negative | 251978 - 253633 | 63848.0 |
| pts trehalose transporter subunit iibc | BEN53_RS01315 | Not Available | Negative | 253683 - 255104 | 51105.0 |
| trehalose operon repressor trer | BEN53_RS01320 | Not Available | Negative | 255223 - 256170 | 34575.8 |
| mgta regulatory leader peptide mgtl | BEN53_RS01325 | Not Available | Positive | 256355 - 256408 | 2122.69 |
| magnesium-translocating p-type atpase | BEN53_RS01330 | Not Available | Positive | 256549 - 259245 | 99464.2 |
| 2-iminobutanoate/2-iminopropanoate deaminase | BEN53_RS01335 | Not Available | Negative | 259451 - 259837 | 13612.3 |
| aspartate carbamoyltransferase regulatory subunit | BEN53_RS01340 | Not Available | Negative | 259910 - 260371 | 17135.6 |
| aspartate carbamoyltransferase | BEN53_RS01345 | Not Available | Negative | 260384 - 261319 | 34429.3 |
| pyr operon leader peptide | BEN53_RS01350 | Not Available | Negative | 261323 - 261457 | 5098.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




