Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BEN53_RS05055 | Not Available | Positive | 981860 - 982000 | 5527.85 |
| Antiterminator protein q | BEN53_RS05060 | Not Available | Positive | 982085 - 982441 | 13292.2 |
| hypothetical protein | BEN53_RS05065 | Not Available | Negative | 982421 - 983635 | 46485.8 |
| Putative nucleoid-associated protein | BEN53_RS05070 | Not Available | Negative | 983638 - 984813 | 44153.2 |
| Holin | BEN53_RS05080 | Not Available | Positive | 985105 - 985431 | 11389.1 |
| Lysin | BEN53_RS05085 | Not Available | Positive | 985435 - 985911 | 17795.3 |
| Rz1 protein | BEN53_RS27085 | Not Available | Positive | 986128 - 986310 | 6631.51 |
| Bor protein precursor | BEN53_RS05095 | Not Available | Negative | 986401 - 986694 | 10414.7 |
| Hypothetical protein | BEN53_RS05100 | Not Available | Negative | 987057 - 987251 | 7434.8 |
| Dna packaging protein | BEN53_RS05110 | Not Available | Positive | 987640 - 988185 | 20429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




