Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | BEN53_RS20660 | Not Available | Negative | 4036701 - 4037378 | 24555.7 |
| adenine-specific dna-methyltransferase | BEN53_RS20665 | Not Available | Negative | 4037396 - 4038232 | 32087.2 |
| cell division protein damx | BEN53_RS20670 | Not Available | Negative | 4038339 - 4039625 | 46090.2 |
| 3-dehydroquinate synthase | BEN53_RS20675 | Not Available | Negative | 4039717 - 4040805 | 38856.3 |
| shikimate kinase arok | BEN53_RS20680 | Not Available | Negative | 4040862 - 4041383 | 19539.2 |
| dna uptake porin hofq | BEN53_RS20685 | Not Available | Negative | 4041784 - 4043022 | 44753.9 |
| dna utilization protein hofp | BEN53_RS20690 | Not Available | Negative | 4042934 - 4043338 | 15010.9 |
| dna utilization protein hofo | BEN53_RS20695 | Not Available | Negative | 4043328 - 4043768 | 16754.0 |
| dna utilization protein hofn | BEN53_RS20700 | Not Available | Negative | 4043752 - 4044291 | 20765.1 |
| dna utilization protein hofm | BEN53_RS20705 | Not Available | Negative | 4044291 - 4045070 | 29035.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




