Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | BEN53_RS20610 | Not Available | Negative | 4027441 - 4028469 | 36401.1 |
| yhft family protein | BEN53_RS20615 | Not Available | Negative | 4028481 - 4029785 | 46475.2 |
| duf2620 domain-containing protein | BEN53_RS20620 | Not Available | Negative | 4029797 - 4030150 | 12479.5 |
| phosphotriesterase-related protein | BEN53_RS20625 | Not Available | Negative | 4030161 - 4031039 | 32785.2 |
| phosphopentomutase | BEN53_RS20630 | Not Available | Negative | 4031036 - 4032262 | 44544.2 |
| yhfx family plp-dependent enzyme | BEN53_RS20635 | Not Available | Negative | 4032262 - 4033425 | 42328.9 |
| hypothetical protein | BEN53_RS20640 | Not Available | Negative | 4033509 - 4033871 | 13572.6 |
| gntr family transcriptional regulator yhfz | BEN53_RS20645 | Not Available | Negative | 4033888 - 4034793 | 33542.4 |
| tryptophan--trna ligase | BEN53_RS20650 | Not Available | Negative | 4034953 - 4035957 | 37439.9 |
| phosphoglycolate phosphatase | BEN53_RS20655 | Not Available | Negative | 4035950 - 4036708 | 27405.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




