Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system ancillary protein kefg | BEN53_RS20500 | Not Available | Negative | 4007194 - 4007745 | 20801.9 |
| abc transporter atp-binding protein | BEN53_RS20510 | Not Available | Positive | 4007876 - 4009789 | 71761.4 |
| hydrolase | BEN53_RS20515 | Not Available | Positive | 4009789 - 4010811 | 38459.3 |
| yheu family protein | BEN53_RS20520 | Not Available | Positive | 4010805 - 4011023 | 8470.04 |
| phosphoribulokinase | BEN53_RS20525 | Not Available | Positive | 4011077 - 4011946 | 32345.9 |
| osmc family protein | BEN53_RS20530 | Not Available | Negative | 4012001 - 4012405 | 14517.6 |
| camp-activated global transcriptional regulator crp | BEN53_RS20540 | Not Available | Positive | 4012707 - 4013339 | 23641.9 |
| yccs/yhfk family putative transporter | BEN53_RS20545 | Not Available | Positive | 4013390 - 4015480 | 79505.7 |
| bifunctional acetylornithine/succinyldiaminopimelate transaminase | BEN53_RS20550 | Not Available | Negative | 4015547 - 4016767 | 43822.5 |
| aminodeoxychorismate synthase component 2 | BEN53_RS20555 | Not Available | Negative | 4016853 - 4017416 | 20707.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




