Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | BEN53_RS20390 | Not Available | Negative | 3993074 - 3993376 | 11199.8 |
| 50s ribosomal protein l4 | BEN53_RS20395 | Not Available | Negative | 3993373 - 3993978 | 22087.8 |
| 50s ribosomal protein l3 | BEN53_RS20400 | Not Available | Negative | 3993989 - 3994618 | 22244.8 |
| 30s ribosomal protein s10 | BEN53_RS20405 | Not Available | Negative | 3994651 - 3994962 | 11736.3 |
| prepilin peptidase | BEN53_RS20415 | Not Available | Positive | 3995341 - 3995808 | 17035.1 |
| bacterioferritin | BEN53_RS20420 | Not Available | Negative | 3995805 - 3996281 | 18353.1 |
| bacterioferritin-associated ferredoxin | BEN53_RS20425 | Not Available | Negative | 3996354 - 3996548 | 7475.27 |
| elongation factor tu | BEN53_RS20435 | Not Available | Negative | 3996731 - 3997915 | 43286.1 |
| elongation factor g | BEN53_RS20440 | Not Available | Negative | 3997986 - 4000100 | 77585.8 |
| 30s ribosomal protein s7 | BEN53_RS20445 | Not Available | Negative | 4000197 - 4000667 | 17605.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




