Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin family protein | BEN53_RS01195 | Not Available | Negative | 228282 - 229625 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase msra | BEN53_RS01200 | Not Available | Negative | 229948 - 230586 | 23335.3 |
| autotransporter assembly complex protein tama | BEN53_RS01210 | Not Available | Positive | 230792 - 232525 | 64811.7 |
| autotransporter assembly complex protein tamb | BEN53_RS01215 | Not Available | Positive | 232522 - 236301 | 136716.0 |
| gamma-glutamylcyclotransferase | BEN53_RS01220 | Not Available | Positive | 236304 - 236645 | 12867.2 |
| type ii toxin-antitoxin system antitoxin chps | BEN53_RS01225 | Not Available | Positive | 236857 - 237108 | 9332.18 |
| endoribonuclease toxin chpb | BEN53_RS01230 | Not Available | Positive | 237102 - 237452 | 12454.2 |
| inorganic diphosphatase | BEN53_RS01235 | Not Available | Negative | 237531 - 238061 | 19732.6 |
| galactofuranose abc transporter substrate-binding protein ytfq | BEN53_RS01240 | Not Available | Positive | 238371 - 239327 | 34314.5 |
| galactofuranose abc transporter, atp-binding protein ytfr | BEN53_RS01245 | Not Available | Positive | 239460 - 240962 | 55257.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




