Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | BEN53_RS19590 | Not Available | Negative | 3855953 - 3857440 | 54888.0 |
| ribosome maturation factor rimp | BEN53_RS19595 | Not Available | Negative | 3857468 - 3857920 | 16651.9 |
| Trna-met | Not Available | Not Available | Positive | 3858127 - 3858203 | Not Available |
| argininosuccinate synthase | BEN53_RS19605 | Not Available | Positive | 3858551 - 3859894 | 49915.4 |
| phosphoethanolamine transferase | BEN53_RS19610 | Not Available | Negative | 3859902 - 3861527 | 60788.9 |
| Trna-leu | Not Available | Not Available | Positive | 3861984 - 3862070 | Not Available |
| preprotein translocase subunit secg | BEN53_RS19620 | Not Available | Negative | 3862085 - 3862417 | 11365.8 |
| phosphoglucosamine mutase | BEN53_RS19625 | Not Available | Negative | 3862645 - 3863982 | 47519.4 |
| dihydropteroate synthase | BEN53_RS19630 | Not Available | Negative | 3863975 - 3864823 | 30616.9 |
| atp-dependent zinc metalloprotease ftsh | BEN53_RS19635 | Not Available | Negative | 3864913 - 3866847 | 70712.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




