Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | BEN53_RS01095 | Not Available | Negative | 207961 - 208932 | 35967.6 |
| trap transporter large permease | BEN53_RS01100 | Not Available | Negative | 208985 - 210286 | 45914.5 |
| trap transporter small permease | BEN53_RS01105 | Not Available | Negative | 210329 - 210805 | 17488.3 |
| fad-binding protein | BEN53_RS01110 | Not Available | Negative | 210826 - 212907 | 75868.2 |
| acyl coa:acetate/3-ketoacid coa transferase | BEN53_RS01115 | Not Available | Negative | 212904 - 214445 | 55636.7 |
| enoyl-coa hydratase/isomerase family protein | BEN53_RS01120 | Not Available | Negative | 214455 - 215231 | 28561.5 |
| sugar phosphate isomerase/epimerase family protein | BEN53_RS01125 | Not Available | Negative | 215241 - 216083 | 31024.1 |
| 3-ketoacyl-acp reductase | BEN53_RS01130 | Not Available | Negative | 216093 - 216884 | 28466.4 |
| tetr/acrr family transcriptional regulator | BEN53_RS01135 | Not Available | Positive | 217097 - 217744 | 24773.7 |
| cell division protein ytfb | BEN53_RS01140 | Not Available | Negative | 217728 - 218366 | 23515.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




