Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase algx-related protein | BEN53_RS18410 | Not Available | Negative | 3625602 - 3626486 | 33996.9 |
| glycosyltransferase family 2 protein | BEN53_RS18415 | Not Available | Negative | 3626553 - 3628766 | 84419.2 |
| hypothetical protein | BEN53_RS18420 | Not Available | Negative | 3628783 - 3629796 | 38551.3 |
| polysaccharide transporter | BEN53_RS18425 | Not Available | Negative | 3630073 - 3631275 | 45539.1 |
| abc transporter atp-binding protein | BEN53_RS18430 | Not Available | Negative | 3631289 - 3631939 | 24537.8 |
| abc transporter permease | BEN53_RS18435 | Not Available | Negative | 3631951 - 3632751 | 30186.2 |
| polysaccharide biosynthesis/export family protein | BEN53_RS18440 | Not Available | Negative | 3632818 - 3634563 | 63923.5 |
| hypothetical protein | BEN53_RS27205 | Not Available | Negative | 3634590 - 3634961 | 14017.7 |
| hypothetical protein | BEN53_RS27645 | Not Available | Negative | 3635686 - 3635827 | 5650.0 |
| gspm family type ii secretion system protein yghd | BEN53_RS18450 | Not Available | Negative | 3636388 - 3636924 | 20316.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




