Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS18195 | Not Available | Positive | 3589444 - 3590487 | 40203.8 |
| hypothetical protein | BEN53_RS27905 | Not Available | Positive | 3590630 - 3590859 | 8341.34 |
| transposase dna-binding-containing protein | BEN53_RS18200 | Not Available | Negative | 3590938 - 3591174 | 8919.54 |
| acyltransferase | BEN53_RS18205 | Not Available | Positive | 3591511 - 3591963 | 16084.6 |
| inovirus-type gp2 protein | BEN53_RS18210 | Not Available | Negative | 3592090 - 3592656 | 21320.7 |
| inovirus-type gp2 protein | BEN53_RS18215 | Not Available | Negative | 3592684 - 3592926 | 9019.5 |
| putative zinc ribbon protein | BEN53_RS18220 | Not Available | Negative | 3593128 - 3593553 | 15672.8 |
| putative zinc ribbon protein | BEN53_RS18225 | Not Available | Negative | 3593550 - 3593933 | 14817.3 |
| inovirus gp2 family protein | BEN53_RS18230 | Not Available | Negative | 3594100 - 3594669 | 21756.0 |
| hypothetical protein | BEN53_RS18235 | Not Available | Positive | 3594868 - 3595065 | 7249.25 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




