Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yqgg | BEN53_RS27840 | Not Available | Negative | 3563535 - 3563678 | 5220.17 |
| protein yqgd | BEN53_RS27845 | Not Available | Negative | 3563789 - 3564040 | 9519.81 |
| methionine adenosyltransferase | BEN53_RS18050 | Not Available | Positive | 3564096 - 3565250 | 41954.0 |
| galactose/proton symporter | BEN53_RS18055 | Not Available | Positive | 3565675 - 3567069 | 50985.6 |
| hypothetical protein | BEN53_RS18060 | Not Available | Positive | 3567146 - 3567643 | 19194.4 |
| deoxyribonuclease i | BEN53_RS18065 | Not Available | Positive | 3567738 - 3568445 | 26724.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | BEN53_RS18070 | Not Available | Positive | 3568525 - 3569256 | 26979.7 |
| glutathione synthase | BEN53_RS18075 | Not Available | Positive | 3569269 - 3570219 | 35563.0 |
| yqge/algh family protein | BEN53_RS18080 | Not Available | Positive | 3570328 - 3570891 | 20687.1 |
| holliday junction resolvase ruvx | BEN53_RS18085 | Not Available | Positive | 3570891 - 3571307 | 15187.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




