Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phospho-beta-glucosidase bgla | BEN53_RS17835 | Not Available | Positive | 3521962 - 3523395 | 55182.4 |
| aminomethyl-transferring glycine dehydrogenase | BEN53_RS17840 | Not Available | Negative | 3523559 - 3526432 | 104341.0 |
| glycine cleavage system protein gcvh | BEN53_RS17845 | Not Available | Negative | 3526551 - 3526940 | 13811.8 |
| glycine cleavage system aminomethyltransferase gcvt | BEN53_RS17850 | Not Available | Negative | 3526964 - 3528058 | 40158.1 |
| hypothetical protein | BEN53_RS27195 | Not Available | Positive | 3528349 - 3528432 | 3232.07 |
| fad-dependent 2-octaprenylphenol hydroxylase | BEN53_RS17855 | Not Available | Negative | 3528506 - 3529708 | 44210.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | BEN53_RS17860 | Not Available | Negative | 3529731 - 3530909 | 42378.0 |
| xaa-pro aminopeptidase | BEN53_RS17865 | Not Available | Negative | 3530906 - 3532231 | 49801.1 |
| upf0149 family protein ygfb | BEN53_RS17870 | Not Available | Negative | 3532257 - 3532835 | 21230.8 |
| cell division protein zapa | BEN53_RS17880 | Not Available | Positive | 3533003 - 3533332 | 12594.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




