Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sucrose-specific pts transporter subunit iibc | BEN53_RS16950 | Not Available | Positive | 3344965 - 3346335 | 48187.1 |
| sucrose-6-phosphate hydrolase | BEN53_RS16955 | Not Available | Positive | 3346335 - 3347744 | 53707.7 |
| laci family dna-binding transcriptional regulator | BEN53_RS16960 | Not Available | Positive | 3347770 - 3348777 | 37623.1 |
| 7-carboxy-7-deazaguanine synthase quee | BEN53_RS16965 | Not Available | Negative | 3348862 - 3349533 | 25031.0 |
| lema family protein | BEN53_RS16970 | Not Available | Positive | 3349706 - 3350308 | 22522.8 |
| hypothetical protein | BEN53_RS16975 | Not Available | Positive | 3350322 - 3350993 | 24446.5 |
| tpm domain-containing protein | BEN53_RS16980 | Not Available | Positive | 3351230 - 3352378 | 42326.3 |
| tpm domain-containing protein | BEN53_RS16985 | Not Available | Positive | 3352384 - 3353256 | 31930.0 |
| phosphopyruvate hydratase | BEN53_RS16990 | Not Available | Negative | 3353316 - 3354614 | 45657.6 |
| glutamine hydrolyzing ctp synthase | BEN53_RS16995 | Not Available | Negative | 3354701 - 3356338 | 60377.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




