Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate responsive antiterminator | BEN53_RS16900 | Not Available | Positive | 3332958 - 3333533 | 20783.6 |
| electron transfer flavoprotein subunit alpha/fixb family protein | BEN53_RS16905 | Not Available | Negative | 3333680 - 3334540 | 30323.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | BEN53_RS16910 | Not Available | Negative | 3334537 - 3335316 | 28807.2 |
| mfs transporter | BEN53_RS16915 | Not Available | Negative | 3335294 - 3336703 | 50834.3 |
| fad-binding oxidoreductase | BEN53_RS16920 | Not Available | Negative | 3336725 - 3338179 | 53709.5 |
| sdr family oxidoreductase | BEN53_RS16925 | Not Available | Negative | 3338249 - 3339034 | 28103.6 |
| mfs transporter | BEN53_RS16930 | Not Available | Positive | 3339352 - 3340629 | 46801.5 |
| fggy-family carbohydrate kinase | BEN53_RS16935 | Not Available | Positive | 3340656 - 3342134 | 54304.1 |
| aminoimidazole riboside kinase | BEN53_RS16940 | Not Available | Positive | 3342299 - 3343216 | 32772.4 |
| carbohydrate porin | BEN53_RS16945 | Not Available | Positive | 3343387 - 3344904 | 55625.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




