Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsh protease activity modulator hflk | BEN53_RS00945 | Not Available | Positive | 183421 - 184680 | 45548.5 |
| protease modulator hflc | BEN53_RS00950 | Not Available | Positive | 184683 - 185687 | 37652.0 |
| duf2065 domain-containing protein | BEN53_RS00955 | Not Available | Positive | 185769 - 185966 | 7166.26 |
| adenylosuccinate synthase | BEN53_RS00960 | Not Available | Positive | 186070 - 187368 | 47347.7 |
| nitric oxide-sensing transcriptional repressor nsrr | BEN53_RS00965 | Not Available | Positive | 187573 - 187998 | 15594.0 |
| ribonuclease r | BEN53_RS00970 | Not Available | Positive | 188037 - 190478 | 92120.5 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | BEN53_RS00975 | Not Available | Positive | 190569 - 191300 | 26558.3 |
| yjfi family protein | BEN53_RS00980 | Not Available | Positive | 191427 - 191828 | 14935.8 |
| pspa/im30 family protein | BEN53_RS00985 | Not Available | Positive | 191847 - 192545 | 25335.0 |
| yjfk family protein | BEN53_RS00990 | Not Available | Positive | 192595 - 193254 | 25058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




