Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative quaternary ammonium compound-resistance protein qace | BEN53_RS05010 | Not Available | Positive | 976721 - 977053 | 11945.1 |
| protein ylcj | BEN53_RS27080 | Not Available | Positive | 977102 - 977252 | 5628.26 |
| Gp53 | BEN53_RS05015 | Not Available | Positive | 977310 - 978836 | 57388.9 |
| Putative antirepressor protein ant | BEN53_RS05020 | Not Available | Positive | 978948 - 979265 | 12112.6 |
| St313-td protein | BEN53_RS05025 | Not Available | Positive | 979470 - 980399 | 35322.1 |
| hypothetical protein | BEN53_RS05030 | Not Available | Positive | 980498 - 980599 | 3717.44 |
| Hypothetical protein | BEN53_RS05035 | Not Available | Positive | 980596 - 981051 | 17439.0 |
| Nine | BEN53_RS05040 | Not Available | Positive | 981051 - 981221 | 6495.08 |
| Hypothetical protein | BEN53_RS05045 | Not Available | Positive | 981214 - 981504 | 10334.6 |
| Holliday junction resolvase rusa | BEN53_RS05050 | Not Available | Positive | 981501 - 981863 | 13846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




