Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | BEN53_RS14890 | Not Available | Negative | 2913835 - 2914314 | 17113.9 |
| fimbrial protein | BEN53_RS14895 | Not Available | Negative | 2914311 - 2914814 | 17535.1 |
| fimbria/pilus periplasmic chaperone | BEN53_RS14900 | Not Available | Negative | 2914831 - 2915583 | 27841.6 |
| fimbrial biogenesis outer membrane usher protein | BEN53_RS14905 | Not Available | Negative | 2915603 - 2918251 | 97142.9 |
| fimbrial protein | BEN53_RS14910 | Not Available | Negative | 2918332 - 2918898 | 19955.6 |
| phosphohistidine phosphatase sixa | BEN53_RS14915 | Not Available | Negative | 2919466 - 2919951 | 17249.8 |
| fatty acid oxidation complex subunit alpha fadj | BEN53_RS14920 | Not Available | Negative | 2920154 - 2922298 | 77082.9 |
| acetyl-coa c-acyltransferase fadi | BEN53_RS14925 | Not Available | Negative | 2922298 - 2923608 | 46561.4 |
| yfcz/yiis family protein | BEN53_RS14930 | Not Available | Negative | 2923789 - 2924073 | 10318.2 |
| long-chain fatty acid transporter fadl | BEN53_RS14940 | Not Available | Positive | 2924445 - 2925785 | 48553.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




