Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p hydroxylase | BEN53_RS14840 | Not Available | Negative | 2905575 - 2906123 | 21101.6 |
| sulfite exporter taue/safe family protein | BEN53_RS14845 | Not Available | Negative | 2906123 - 2906932 | 28631.2 |
| penicillin-insensitive murein endopeptidase | BEN53_RS14850 | Not Available | Negative | 2906932 - 2907756 | 30197.5 |
| chorismate synthase | BEN53_RS14855 | Not Available | Negative | 2907760 - 2908845 | 39169.9 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | BEN53_RS14860 | Not Available | Negative | 2908880 - 2909812 | 35003.6 |
| endonuclease smrb | BEN53_RS14865 | Not Available | Positive | 2909978 - 2910529 | 21000.5 |
| aaa family atpase | BEN53_RS14870 | Not Available | Positive | 2910615 - 2911829 | 45079.0 |
| hypothetical protein | BEN53_RS14875 | Not Available | Positive | 2911795 - 2912418 | 23415.7 |
| stfh/yfco family fimbrial adhesin | BEN53_RS14880 | Not Available | Negative | 2912467 - 2913306 | 31025.7 |
| fimbrial protein | BEN53_RS14885 | Not Available | Negative | 2913308 - 2913838 | 18766.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




