Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate ammonia-lyase | BEN53_RS00745 | Not Available | Negative | 146664 - 148100 | 52359.2 |
| fxsa family protein | BEN53_RS00750 | Not Available | Positive | 148437 - 148913 | 17679.1 |
| l-methionine/branched-chain amino acid transporter | BEN53_RS00755 | Not Available | Negative | 148929 - 150185 | 44814.2 |
| co-chaperone groes | BEN53_RS00760 | Not Available | Positive | 150461 - 150754 | 10387.6 |
| chaperonin groel | BEN53_RS00765 | Not Available | Positive | 150798 - 152444 | 57332.4 |
| duf4156 domain-containing protein | BEN53_RS00770 | Not Available | Positive | 152579 - 152932 | 11959.2 |
| yjej family protein | BEN53_RS00775 | Not Available | Negative | 152982 - 153851 | 32915.9 |
| ef-p beta-lysylation protein epmb | BEN53_RS00780 | Not Available | Negative | 154086 - 155114 | 38700.8 |
| elongation factor p | BEN53_RS00785 | Not Available | Positive | 155156 - 155722 | 20592.4 |
| lipoprotein antitoxin entericidin a | BEN53_RS00790 | Not Available | Positive | 155774 - 155899 | 4329.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




