Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/glutamate racemase family protein | BEN53_RS00685 | Not Available | Positive | 136053 - 136772 | 26450.1 |
| anaerobic c4-dicarboxylate transporter | BEN53_RS00690 | Not Available | Positive | 136831 - 138129 | 45617.6 |
| aspartate ammonia-lyase | BEN53_RS00695 | Not Available | Positive | 138352 - 139752 | 51114.6 |
| hypothetical protein | BEN53_RS00705 | Not Available | Negative | 139988 - 140678 | 24858.5 |
| tyrosine-type recombinase/integrase | BEN53_RS00715 | Not Available | Negative | 140864 - 142126 | 47763.7 |
| Trna-phe | Not Available | Not Available | Positive | 142324 - 142399 | Not Available |
| transcriptional regulator | BEN53_RS00725 | Not Available | Negative | 142506 - 143081 | 21934.3 |
| protein-disulfide reductase dsbd | BEN53_RS00730 | Not Available | Negative | 143118 - 144815 | 61900.9 |
| divalent cation tolerance protein cuta | BEN53_RS00735 | Not Available | Negative | 144791 - 145129 | 12331.7 |
| anaerobic c4-dicarboxylate transporter dcua | BEN53_RS00740 | Not Available | Negative | 145245 - 146546 | 45753.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




