Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element isec31 family transposase | BEN53_RS00620 | Not Available | Negative | 126329 - 127542 | 47167.3 |
| hypothetical protein | BEN53_RS27865 | Not Available | Positive | 127570 - 127659 | 3319.86 |
| hypothetical protein | BEN53_RS00635 | Not Available | Positive | 128053 - 128351 | 11191.6 |
| d-galactonate utilization transcriptional regulator dgor | BEN53_RS00640 | Not Available | Positive | 128738 - 129427 | 26081.1 |
| 2-dehydro-3-deoxygalactonokinase | BEN53_RS00645 | Not Available | Positive | 129424 - 130302 | 31479.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | BEN53_RS00650 | Not Available | Positive | 130286 - 130903 | 21443.9 |
| galactonate dehydratase | BEN53_RS00655 | Not Available | Positive | 130900 - 132048 | 42552.3 |
| mfs transporter | BEN53_RS00660 | Not Available | Positive | 132123 - 133460 | 48812.8 |
| hypothetical protein | BEN53_RS00670 | Not Available | Negative | 133654 - 134154 | 19349.6 |
| hypochlorite stress dna-binding transcriptional regulator hypt | BEN53_RS00680 | Not Available | Negative | 134814 - 135713 | 33813.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




