Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucans biosynthesis protein mdog | BEN53_RS12900 | Not Available | Negative | 2498789 - 2500324 | 57885.4 |
| glucans biosynthesis protein mdoc | BEN53_RS12915 | Not Available | Positive | 2500718 - 2501875 | 44672.9 |
| cardiolipin synthase clsc | BEN53_RS12920 | Not Available | Negative | 2501883 - 2503364 | 55913.7 |
| o-acetyl-adp-ribose deacetylase | BEN53_RS12925 | Not Available | Negative | 2503306 - 2503839 | 18881.5 |
| protein ymda | BEN53_RS12930 | Not Available | Negative | 2503934 - 2504245 | 11180.6 |
| curli assembly chaperone csgc | BEN53_RS12935 | Not Available | Negative | 2504366 - 2504698 | 11969.4 |
| curli major subunit csga | BEN53_RS12940 | Not Available | Negative | 2504757 - 2505212 | 14993.0 |
| curli minor subunit csgb | BEN53_RS12945 | Not Available | Negative | 2505253 - 2505708 | 15909.8 |
| biofilm master transcriptional regulator csgd | BEN53_RS12955 | Not Available | Positive | 2506463 - 2507113 | 24931.0 |
| curli production assembly/transport protein csge | BEN53_RS12960 | Not Available | Positive | 2507118 - 2507507 | 14879.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




