Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator dcur | BEN53_RS00515 | Not Available | Positive | 104919 - 105644 | 27815.1 |
| l-asparaginase 2 | BEN53_RS00520 | Not Available | Negative | 106238 - 107284 | 36865.7 |
| anaerobic c4-dicarboxylate transporter | BEN53_RS00525 | Not Available | Negative | 107772 - 109097 | 46688.6 |
| aspartate ammonia-lyase | BEN53_RS00530 | Not Available | Negative | 109262 - 110662 | 51101.5 |
| peptidase t | BEN53_RS00535 | Not Available | Positive | 111528 - 112784 | 45837.3 |
| c4-dicarboxylate transporter dcuc | BEN53_RS00540 | Not Available | Positive | 112781 - 114142 | 47902.6 |
| hypothetical protein | BEN53_RS27265 | Not Available | Negative | 114195 - 114323 | 4396.38 |
| maturase | BEN53_RS00550 | Not Available | Positive | 114788 - 115234 | 15925.1 |
| hypothetical protein | BEN53_RS27515 | Not Available | Positive | 115186 - 115350 | 6436.69 |
| hypothetical protein | BEN53_RS27520 | Not Available | Positive | 115398 - 115669 | 9730.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




