Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| brex system p-loop protein brxc | BEN53_RS00465 | Not Available | Negative | 92351 - 95992 | 139280.0 |
| duf1788 domain-containing protein | BEN53_RS00470 | Not Available | Negative | 96004 - 96606 | 22846.7 |
| duf1819 family protein | BEN53_RS00475 | Not Available | Negative | 96603 - 97205 | 22559.1 |
| hypothetical protein | BEN53_RS00480 | Not Available | Positive | 97502 - 98500 | 38849.5 |
| hypothetical protein | BEN53_RS00485 | Not Available | Positive | 98784 - 98993 | 7827.64 |
| is1 family transposase | BEN53_RS00490 | Not Available | Positive | 99050 - 99747 | 26612.5 |
| esterase-like activity of phytase family protein | BEN53_RS00495 | Not Available | Negative | 99865 - 101208 | 49245.3 |
| is5 family transposase | BEN53_RS00500 | Not Available | Negative | 101462 - 102430 | 36640.9 |
| hypothetical protein | BEN53_RS00505 | Not Available | Positive | 102463 - 102576 | 4387.34 |
| is3 family transposase | BEN53_RS00510 | Not Available | Positive | 102749 - 103977 | 46464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




