Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS00405 | Not Available | Negative | 78288 - 78860 | 22172.1 |
| helix-turn-helix transcriptional regulator | BEN53_RS00410 | Not Available | Negative | 78946 - 79152 | 7814.6 |
| hypothetical protein | BEN53_RS00415 | Not Available | Negative | 79535 - 80326 | 30373.7 |
| hemolysin expression modulator hha | BEN53_RS00420 | Not Available | Positive | 81282 - 81494 | 8407.11 |
| inovirus-type gp2 protein | BEN53_RS00425 | Not Available | Positive | 81726 - 82325 | 23190.9 |
| putative zinc ribbon protein | BEN53_RS00435 | Not Available | Positive | 82707 - 83090 | 14827.3 |
| putative zinc ribbon protein | BEN53_RS00440 | Not Available | Positive | 83087 - 83512 | 15572.8 |
| protease lon-related brex system protein brxl | BEN53_RS00450 | Not Available | Negative | 83777 - 85861 | 77376.2 |
| brex-1 system phosphatase pglz type a | BEN53_RS00455 | Not Available | Negative | 85872 - 88469 | 100134.0 |
| brex-1 system adenine-specific dna-methyltransferase pglx | BEN53_RS00460 | Not Available | Negative | 88646 - 92305 | 140270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




