Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | BEN53_RS11075 | Not Available | Negative | 2151854 - 2153260 | 52832.9 |
| hypothetical protein | BEN53_RS27130 | Not Available | Negative | 2153339 - 2153404 | 2183.77 |
| duf2554 family protein | BEN53_RS11080 | Not Available | Positive | 2153581 - 2153811 | 8727.36 |
| 23s rrna 5-hydroxycytidine c2501 synthase | BEN53_RS11085 | Not Available | Negative | 2153903 - 2155864 | 72738.0 |
| dna-binding transcriptional regulator sutr | BEN53_RS11090 | Not Available | Negative | 2155937 - 2156473 | 19633.3 |
| bene family transporter ydco | BEN53_RS11095 | Not Available | Positive | 2156565 - 2157740 | 40585.8 |
| rna-guided endonuclease insq/tnpb family protein | BEN53_RS11100 | Not Available | Negative | 2157780 - 2158988 | 45712.0 |
| hypothetical protein | BEN53_RS11105 | Not Available | Positive | 2158996 - 2159502 | 19243.3 |
| duf3313 domain-containing protein | BEN53_RS11110 | Not Available | Negative | 2159520 - 2160188 | 24428.3 |
| tellurite resistance methyltransferase tehb | BEN53_RS11115 | Not Available | Negative | 2160491 - 2161084 | 22432.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




