Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS27610 | Not Available | Positive | 2118371 - 2118658 | 10991.0 |
| leucine-rich repeat domain-containing protein | BEN53_RS10910 | Not Available | Positive | 2119102 - 2120358 | 48001.9 |
| nitrate/nitrite transporter naru | BEN53_RS10915 | Not Available | Positive | 2120668 - 2122056 | 49926.1 |
| nitrate reductase z subunit alpha | BEN53_RS10920 | Not Available | Positive | 2122151 - 2125891 | 140271.0 |
| nitrate reductase subunit beta | BEN53_RS10925 | Not Available | Positive | 2125888 - 2127432 | 58534.0 |
| nitrate reductase molybdenum cofactor assembly chaperone | BEN53_RS10930 | Not Available | Positive | 2127432 - 2128127 | 26277.2 |
| respiratory nitrate reductase subunit gamma | BEN53_RS10935 | Not Available | Positive | 2128124 - 2128804 | 25684.2 |
| phzf family isomerase | BEN53_RS10940 | Not Available | Positive | 2128884 - 2129777 | 32326.6 |
| is110-like element is621 family transposase | BEN53_RS10945 | Not Available | Negative | 2129934 - 2130914 | 36445.1 |
| n-hydroxyarylamine o-acetyltransferase | BEN53_RS10955 | Not Available | Negative | 2131152 - 2131997 | 32293.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




