Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance transcriptional regulator marr | BEN53_RS10595 | Not Available | Negative | 2041352 - 2041786 | 16070.0 |
| naat family transporter marc | BEN53_RS10600 | Not Available | Positive | 2041998 - 2042663 | 23618.7 |
| l-arabinose mfs transporter | BEN53_RS10605 | Not Available | Negative | 2042688 - 2043878 | 42570.9 |
| putative protein ynek | BEN53_RS10610 | Not Available | Negative | 2044028 - 2045143 | 42904.8 |
| putrescine utilization regulator ptrr | BEN53_RS10615 | Not Available | Negative | 2045227 - 2046102 | 32173.5 |
| succinate-semialdehyde dehydrogenase | BEN53_RS10620 | Not Available | Positive | 2046203 - 2047591 | 49793.8 |
| glutaminase b | BEN53_RS10625 | Not Available | Positive | 2047655 - 2048581 | 33517.6 |
| duf4186 domain-containing protein | BEN53_RS10630 | Not Available | Positive | 2048581 - 2048940 | 13526.5 |
| diguanylate cyclase | BEN53_RS10640 | Not Available | Positive | 2049079 - 2050497 | 52095.4 |
| tagaturonate reductase | BEN53_RS10650 | Not Available | Positive | 2050725 - 2052176 | 54811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




