Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| division septum protein blr | BEN53_RS10225 | Not Available | Negative | 1969624 - 1969749 | 4600.64 |
| oxidoreductase | BEN53_RS10230 | Not Available | Positive | 1969992 - 1971032 | 38258.6 |
| adenosine deaminase | BEN53_RS10235 | Not Available | Negative | 1971068 - 1972069 | 36406.7 |
| bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase maly | BEN53_RS10240 | Not Available | Negative | 1972173 - 1973345 | 43642.2 |
| pts maltose transporter subunit iicb | BEN53_RS10245 | Not Available | Negative | 1973355 - 1974947 | 56643.5 |
| mal regulon transcriptional regulator mali | BEN53_RS10250 | Not Available | Positive | 1975122 - 1976150 | 36584.8 |
| 7-alpha-hydroxysteroid dehydrogenase | BEN53_RS10255 | Not Available | Positive | 1976262 - 1977029 | 26848.3 |
| dna-binding transcriptional regulator uidr | BEN53_RS10260 | Not Available | Positive | 1977250 - 1977840 | 21800.5 |
| beta-glucuronidase | BEN53_RS10265 | Not Available | Positive | 1978230 - 1980041 | 68478.7 |
| glucuronide transporter | BEN53_RS10270 | Not Available | Positive | 1980038 - 1981411 | 49939.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




