Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monothiol glutaredoxin 4 | BEN53_RS10065 | Not Available | Positive | 1940199 - 1940546 | 12879.5 |
| atp-dependent helicase | BEN53_RS10070 | Not Available | Negative | 1940597 - 1945213 | 169345.0 |
| ribonuclease t | BEN53_RS10075 | Not Available | Negative | 1945306 - 1945953 | 23534.0 |
| lactoylglutathione lyase | BEN53_RS10080 | Not Available | Negative | 1946056 - 1946463 | 14920.7 |
| n-ethylmaleimide reductase | BEN53_RS10085 | Not Available | Negative | 1946544 - 1947641 | 39574.8 |
| dna-binding transcriptional regulator nemr | BEN53_RS10090 | Not Available | Negative | 1947678 - 1948277 | 22288.7 |
| duf1289 domain-containing protein | BEN53_RS10095 | Not Available | Positive | 1948380 - 1948619 | 9359.15 |
| aldo/keto reductase | BEN53_RS10100 | Not Available | Positive | 1948668 - 1949564 | 33677.6 |
| superoxide dismutase | BEN53_RS10105 | Not Available | Positive | 1949645 - 1950166 | 17610.0 |
| fusc family protein | BEN53_RS10110 | Not Available | Negative | 1950167 - 1952179 | 75293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




