Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n,n'-diacetylchitobiose transporter subunit iic | BEN53_RS09605 | Not Available | Positive | 1849320 - 1850678 | 48335.1 |
| pts n,n'-diacetylchitobiose transporter subunit iia | BEN53_RS09610 | Not Available | Positive | 1850729 - 1851079 | 12748.6 |
| transcriptional regulator chbr | BEN53_RS09615 | Not Available | Positive | 1851087 - 1851929 | 32999.4 |
| 6-phospho-beta-glucosidase | BEN53_RS09620 | Not Available | Positive | 1852034 - 1853386 | 50543.3 |
| chitin disaccharide deacetylase | BEN53_RS09625 | Not Available | Positive | 1853399 - 1854157 | 28068.5 |
| catalase hpii | BEN53_RS09630 | Not Available | Negative | 1854204 - 1856465 | 84210.2 |
| cell division activator ceda | BEN53_RS09635 | Not Available | Positive | 1856648 - 1856911 | 10219.5 |
| protein ydjo | BEN53_RS09640 | Not Available | Positive | 1857200 - 1858003 | 30120.4 |
| cystine/sulfocysteine:cation symporter | BEN53_RS09645 | Not Available | Negative | 1858007 - 1859398 | 48731.8 |
| metal-dependent hydrolase | BEN53_RS09650 | Not Available | Negative | 1859531 - 1860121 | 22381.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




