Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine n-succinyltransferase | BEN53_RS09545 | Not Available | Positive | 1839770 - 1840804 | 38458.0 |
| succinylglutamate-semialdehyde dehydrogenase | BEN53_RS09550 | Not Available | Positive | 1840801 - 1842279 | 53022.4 |
| n-succinylarginine dihydrolase | BEN53_RS09555 | Not Available | Positive | 1842276 - 1843619 | 49268.3 |
| succinylglutamate desuccinylase | BEN53_RS09560 | Not Available | Positive | 1843612 - 1844580 | 35829.3 |
| atp-independent periplasmic protein-refolding chaperone spy | BEN53_RS09565 | Not Available | Positive | 1844910 - 1845395 | 18172.1 |
| environmental stress-induced protein ves | BEN53_RS09570 | Not Available | Positive | 1845598 - 1846173 | 21634.1 |
| excinuclease cho | BEN53_RS09575 | Not Available | Negative | 1846133 - 1847020 | 33755.0 |
| ammonia-dependent nad(+) synthetase | BEN53_RS09585 | Not Available | Negative | 1847250 - 1848077 | 30640.5 |
| osmotically-inducible lipoprotein osme | BEN53_RS09590 | Not Available | Positive | 1848279 - 1848617 | 12021.3 |
| pts n,n'-diacetylchitobiose transporter subunit iib | BEN53_RS09600 | Not Available | Positive | 1848916 - 1849236 | 11427.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




